STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSIB_1056ABC-type dipeptide transport system, ATPase component. (336 aa)    
Predicted Functional Partners:
TSIB_1054
ABC-type dipeptide transport system, permease component.
 
 0.994
TSIB_1053
ABC-type dipeptide transport system, permease component.
  
 0.936
TSIB_0331
Cellobiose/beta-glucoside ABC transporter, permease component CbtC.
 
 0.922
TSIB_1081
ABC transporter, ATP-binding protein.
    
0.898
TSIB_1055
ABC-type dipeptide transport system, ATPase component.
 
   
0.893
TSIB_1755
ABC-type dipeptide/oligopeptide transport system, permease component.
 
 0.839
TSIB_1052
ABC-type dipeptide transport system, dipeptide binding protein.
 
 
 0.838
TSIB_1754
ABC-type dipeptide/oligopeptide transport system, permease component.
  
 0.770
TSIB_0330
Cellobiose/beta-glucoside ABC transporter, permease component CbtB.
  
 0.723
TSIB_0332
Cellobiose/beta-glucoside ABC transporter, ATPase component CbtD.
 
   
0.564
Your Current Organism:
Thermococcus sibiricus
NCBI taxonomy Id: 604354
Other names: T. sibiricus MM 739, Thermococcus sibiricus MM 739, Thermococcus sibiricus str. MM 739, Thermococcus sibiricus strain MM 739
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.