Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
TSIB_0428 | TSIB_1152 | Bifunctional D-arabino 3-hexulose-6-phosphate formaldehyde lyase/phosphohexuloisomerase. | Predicted membrane-bound metal-dependent hydrolase. | 0.536 |
TSIB_1150 | TSIB_1151 | Pyridoxal phosphate-dependent aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Thioredoxin reductase. | 0.616 |
TSIB_1150 | TSIB_1152 | Pyridoxal phosphate-dependent aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Predicted membrane-bound metal-dependent hydrolase. | 0.461 |
TSIB_1150 | TSIB_1153 | Pyridoxal phosphate-dependent aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Predicted ATPase, AAA superfamily. | 0.445 |
TSIB_1151 | TSIB_1150 | Thioredoxin reductase. | Pyridoxal phosphate-dependent aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.616 |
TSIB_1151 | TSIB_1152 | Thioredoxin reductase. | Predicted membrane-bound metal-dependent hydrolase. | 0.736 |
TSIB_1151 | TSIB_1153 | Thioredoxin reductase. | Predicted ATPase, AAA superfamily. | 0.727 |
TSIB_1151 | TSIB_1154 | Thioredoxin reductase. | RNA-binding protein, containing THUMP domain. | 0.567 |
TSIB_1152 | TSIB_0428 | Predicted membrane-bound metal-dependent hydrolase. | Bifunctional D-arabino 3-hexulose-6-phosphate formaldehyde lyase/phosphohexuloisomerase. | 0.536 |
TSIB_1152 | TSIB_1150 | Predicted membrane-bound metal-dependent hydrolase. | Pyridoxal phosphate-dependent aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.461 |
TSIB_1152 | TSIB_1151 | Predicted membrane-bound metal-dependent hydrolase. | Thioredoxin reductase. | 0.736 |
TSIB_1152 | TSIB_1153 | Predicted membrane-bound metal-dependent hydrolase. | Predicted ATPase, AAA superfamily. | 0.822 |
TSIB_1152 | TSIB_1154 | Predicted membrane-bound metal-dependent hydrolase. | RNA-binding protein, containing THUMP domain. | 0.656 |
TSIB_1153 | TSIB_1150 | Predicted ATPase, AAA superfamily. | Pyridoxal phosphate-dependent aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.445 |
TSIB_1153 | TSIB_1151 | Predicted ATPase, AAA superfamily. | Thioredoxin reductase. | 0.727 |
TSIB_1153 | TSIB_1152 | Predicted ATPase, AAA superfamily. | Predicted membrane-bound metal-dependent hydrolase. | 0.822 |
TSIB_1153 | TSIB_1154 | Predicted ATPase, AAA superfamily. | RNA-binding protein, containing THUMP domain. | 0.656 |
TSIB_1154 | TSIB_1151 | RNA-binding protein, containing THUMP domain. | Thioredoxin reductase. | 0.567 |
TSIB_1154 | TSIB_1152 | RNA-binding protein, containing THUMP domain. | Predicted membrane-bound metal-dependent hydrolase. | 0.656 |
TSIB_1154 | TSIB_1153 | RNA-binding protein, containing THUMP domain. | Predicted ATPase, AAA superfamily. | 0.656 |