STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSIB_1464Ferredoxin:NADP+ oxidoreductase, subunit beta. (282 aa)    
Predicted Functional Partners:
TSIB_1465
Ferredoxin:NADP+ oxidoreductase, subunit alpha.
 
 0.998
TSIB_1517
Glutamate synthase beta chain-related oxidoreductase, containing 2Fe- 2S and 4Fe-4S clusters.
 
 0.950
pyrD
Dihydroorotate dehydrogenase family protein; Catalyzes the conversion of dihydroorotate to orotate.
 
 
 0.898
TSIB_0443
Dihydroorotase, multifunctional complex type.
 
  
 0.705
pyrE
Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).
  
  
 0.685
pyrB
Aspartate carbamoyltransferase.
  
  
 0.683
TSIB_0440
Orotidine 5'-phosphate decarboxylase.
  
  
 0.653
TSIB_1239
Putative purine permease.
  
  
 0.582
TSIB_1462
Predicted nucleotidyltransferase.
       0.510
TSIB_1463
DUF192 domain containing protein; Belongs to the UPF0127 family.
       0.501
Your Current Organism:
Thermococcus sibiricus
NCBI taxonomy Id: 604354
Other names: T. sibiricus MM 739, Thermococcus sibiricus MM 739, Thermococcus sibiricus str. MM 739, Thermococcus sibiricus strain MM 739
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.