STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSIB_1683NADH-dependent dyhydrogenase related protein. (333 aa)    
Predicted Functional Partners:
TSIB_1682
NADH dependent dyhydrogenase related protein.
 
    
0.864
TSIB_1681
Probable glycosyltransferase.
     
 0.667
TSIB_0583
Galactokinase.
  
 
 0.650
TSIB_2045
RfbB dTDP-glucose 4,6-dehydratase.
  
  
 0.631
TSIB_2028
Pleiotropic regulatory protein degT; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.628
TSIB_2051
Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Thermoanaerobacter; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.628
TSIB_1684
Transcriptional regulator TrmB.
       0.603
TSIB_0208
Xylose isomerase domain-containing protein.
  
  
 0.600
TSIB_0496
Predicted AP endonuclease.
  
  
 0.600
TSIB_1001
Hypothetical protein.
  
  
 0.600
Your Current Organism:
Thermococcus sibiricus
NCBI taxonomy Id: 604354
Other names: T. sibiricus MM 739, Thermococcus sibiricus MM 739, Thermococcus sibiricus str. MM 739, Thermococcus sibiricus strain MM 739
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.