Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
TSIB_1701NAD(P)H-flavin oxidoreductase. (207 aa)    
Predicted Functional Partners:
TSIB_1700
Arsenical-resistance membrane protein.
       0.666
TSIB_1400
Methylmalonyl-CoA epimerase.
  
  
 0.575
TSIB_0172
Membrane-associated metalloprotease, CaaX family.
  
  
 0.497
TSIB_1699
Trx-linked arsenate reductase.
  
  
 0.496
TSIB_0143
Putative ABC transporter.
  
  
 0.457
TSIB_0144
Putative ABC transporter.
  
  
 0.457
TSIB_0214
ABC-type multidrug transport system, permease component.
  
  
 0.457
TSIB_1369
ABC-type multidrug transport system, permease component.
  
  
 0.457
TSIB_1370
ABC-type multidrug transport system, permease component.
  
  
 0.457
TSIB_1982
Daunorubicin resistance ABC transporter membrane protein.
  
  
 0.457
Your Current Organism:
Thermococcus sibiricus
NCBI taxonomy Id: 604354
Other names: T. sibiricus MM 739, Thermococcus sibiricus MM 739, Thermococcus sibiricus str. MM 739, Thermococcus sibiricus strain MM 739
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