Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
TSIB_1752ABC-type dipeptide/oligopeptide transport system, probable periplasmic component. (813 aa)    
Predicted Functional Partners:
TSIB_1755
ABC-type dipeptide/oligopeptide transport system, permease component.
 
     0.836
TSIB_1754
ABC-type dipeptide/oligopeptide transport system, permease component.
 
     0.812
TSIB_1756
ABC-type dipeptide/oligopeptide transport system, ATPase component.
 
     0.772
TSIB_1757
ABC-type dipeptide/oligopeptide transport system, ATPase component.
 
     0.759
TSIB_1758
Hypothetical protein.
       0.717
TSIB_1760
Permease, drug/metabolite transporter (DMT) superfamily.
       0.715
TSIB_0418
Oligosaccharyl transferase STT3 subunit superfamily.
 
     0.701
TSIB_0007
Oligosaccharyl transferase, STT3 subunit.
 
     0.690
TSIB_0414
Putative membrane-bound dolichyl-phosphate-mannose-protein mannosyltransferase.
  
     0.688
TSIB_1568
Predicted ATPase.
  
     0.652
Your Current Organism:
Thermococcus sibiricus
NCBI taxonomy Id: 604354
Other names: T. sibiricus MM 739, Thermococcus sibiricus MM 739, Thermococcus sibiricus str. MM 739, Thermococcus sibiricus strain MM 739
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