STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSIB_1762DUF61 domain containing protein; Belongs to the UPF0216 family. (135 aa)    
Predicted Functional Partners:
TSIB_1763
Hypothetical protein.
       0.818
TSIB_1764
Hypothetical protein.
       0.783
TSIB_1761
Glutamine synthetase.
       0.590
TSIB_0423
DnaG-related small protein.
  
     0.564
TSIB_1335
Pfam01068, DNA_ligase_A_M, ATP dependent DNA ligase domain.
  
     0.481
rnp1
Ribonuclease P protein component 1; Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends; Belongs to the eukaryotic/archaeal RNase P protein component 1 family.
  
     0.459
atpF
A1A0 ATP synthase, subunit F; Produces ATP from ADP in the presence of a proton gradient across the membrane.
 
     0.437
TSIB_0919
DNA polymerase; Contains an intein.
  
     0.430
atpE
A1A0 ATP synthase, subunit E; Produces ATP from ADP in the presence of a proton gradient across the membrane.
 
     0.414
TSIB_0371
Hypothetical protein; RNA-free RNase P that catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. Belongs to the HARP family.
  
     0.410
Your Current Organism:
Thermococcus sibiricus
NCBI taxonomy Id: 604354
Other names: T. sibiricus MM 739, Thermococcus sibiricus MM 739, Thermococcus sibiricus str. MM 739, Thermococcus sibiricus strain MM 739
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.