Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
TSIB_1880 | TSIB_1881 | PstS phosphate ABC transporter, periplasmic phosphate-binding protein; Belongs to the PstS family. | IS element ISTsi3 orfB, probably transposase. | 0.407 |
TSIB_1880 | TSIB_1882 | PstS phosphate ABC transporter, periplasmic phosphate-binding protein; Belongs to the PstS family. | Hypothetical protein. | 0.405 |
TSIB_1881 | TSIB_1880 | IS element ISTsi3 orfB, probably transposase. | PstS phosphate ABC transporter, periplasmic phosphate-binding protein; Belongs to the PstS family. | 0.407 |
TSIB_1881 | TSIB_1882 | IS element ISTsi3 orfB, probably transposase. | Hypothetical protein. | 0.781 |
TSIB_1881 | TSIB_1883 | IS element ISTsi3 orfB, probably transposase. | Hypothetical protein. | 0.546 |
TSIB_1881 | TSIB_1884 | IS element ISTsi3 orfB, probably transposase. | Linocin_M18 bacteriocin protein. | 0.546 |
TSIB_1882 | TSIB_1880 | Hypothetical protein. | PstS phosphate ABC transporter, periplasmic phosphate-binding protein; Belongs to the PstS family. | 0.405 |
TSIB_1882 | TSIB_1881 | Hypothetical protein. | IS element ISTsi3 orfB, probably transposase. | 0.781 |
TSIB_1882 | TSIB_1883 | Hypothetical protein. | Hypothetical protein. | 0.546 |
TSIB_1882 | TSIB_1884 | Hypothetical protein. | Linocin_M18 bacteriocin protein. | 0.546 |
TSIB_1883 | TSIB_1881 | Hypothetical protein. | IS element ISTsi3 orfB, probably transposase. | 0.546 |
TSIB_1883 | TSIB_1882 | Hypothetical protein. | Hypothetical protein. | 0.546 |
TSIB_1883 | TSIB_1884 | Hypothetical protein. | Linocin_M18 bacteriocin protein. | 0.773 |
TSIB_1884 | TSIB_1881 | Linocin_M18 bacteriocin protein. | IS element ISTsi3 orfB, probably transposase. | 0.546 |
TSIB_1884 | TSIB_1882 | Linocin_M18 bacteriocin protein. | Hypothetical protein. | 0.546 |
TSIB_1884 | TSIB_1883 | Linocin_M18 bacteriocin protein. | Hypothetical protein. | 0.773 |