STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSIB_1920UDP-N-acetylglucosamine 2-epimerase. (377 aa)    
Predicted Functional Partners:
TSIB_1921
UDP-N-acetyl-D-mannosaminuronate dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
 
 
 0.994
TSIB_2032
NDP-sugar dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
 
  
 0.722
TSIB_1922
DUF354 multi-domain protein.
 
    0.663
TSIB_2045
RfbB dTDP-glucose 4,6-dehydratase.
  
  
 0.658
TSIB_2028
Pleiotropic regulatory protein degT; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.641
TSIB_2051
Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Thermoanaerobacter; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.641
TSIB_2018
Capsular polysaccharide biosynthesis protein.
  
  
 0.635
TSIB_2049
Lipopolysaccharide O-side chain biosynthesis protein (O-antigen transpoter).
  
  
 0.635
TSIB_1274
Bifunctional phosphatase/dolichol-phosphate glucosyltransferase.
  
  
 0.629
TSIB_1273
UDP-N-acetylglucosamine--dolichyl-phosphate N- acetylglucosaminephosphotransferase.
  
  
 0.581
Your Current Organism:
Thermococcus sibiricus
NCBI taxonomy Id: 604354
Other names: T. sibiricus MM 739, Thermococcus sibiricus MM 739, Thermococcus sibiricus str. MM 739, Thermococcus sibiricus strain MM 739
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.