STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSIB_1960Hypothetical protein. (107 aa)    
Predicted Functional Partners:
TSIB_1961
GTPase, MMR1/HSR1 family.
       0.885
TSIB_1962
Predicted N6-adenine-specific DNA methylase.
       0.885
TSIB_1957
Type II secretion system protein; Contains an intein.
       0.832
TSIB_1958
Hypothetical protein.
       0.832
TSIB_1959
DUF515 domain containing protein.
       0.832
TSIB_1955
Bacterial type II secretion system protein F domain, putative.
       0.829
TSIB_1956
Bacterial type II secretion system protein F domain protein.
       0.829
Your Current Organism:
Thermococcus sibiricus
NCBI taxonomy Id: 604354
Other names: T. sibiricus MM 739, Thermococcus sibiricus MM 739, Thermococcus sibiricus str. MM 739, Thermococcus sibiricus strain MM 739
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.