TSIB_1966 protein (Thermococcus sibiricus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

TSIB_1966

Transcriptional regulatory protein, arsR family. (196 aa)

Predicted Functional Partners:

TSIB_1967

0.872

TSIB_1968

0.855

TSIB_1965

0.823

TSIB_0833

0.564

trpS

0.555

TSIB_1072

0.487

TSIB_0830

0.450

TSIB_0149

0.439

TSIB_1425

0.432

TSIB_1568

0.428

Your Current Organism:

Thermococcus sibiricus

NCBI taxonomy Id: 604354
Other names: T. sibiricus MM 739, Thermococcus sibiricus MM 739, Thermococcus sibiricus str. MM 739, Thermococcus sibiricus strain MM 739

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
TSIB_0149	TSIB_0833	TSIB_0149	TSIB_0833	Phosphomannomutase-related protein.	Kef-type K+ transport systems, predicted NAD-binding component.	0.512
TSIB_0149	TSIB_1966	TSIB_0149	TSIB_1966	Phosphomannomutase-related protein.	Transcriptional regulatory protein, arsR family.	0.439
TSIB_0149	TSIB_1967	TSIB_0149	TSIB_1967	Phosphomannomutase-related protein.	Hypothetical protein.	0.423
TSIB_0830	TSIB_1568	TSIB_0830	TSIB_1568	N-acetyltransferase.	Predicted ATPase.	0.469
TSIB_0830	TSIB_1966	TSIB_0830	TSIB_1966	N-acetyltransferase.	Transcriptional regulatory protein, arsR family.	0.450
TSIB_0833	TSIB_0149	TSIB_0833	TSIB_0149	Kef-type K+ transport systems, predicted NAD-binding component.	Phosphomannomutase-related protein.	0.512
TSIB_0833	TSIB_1072	TSIB_0833	TSIB_1072	Kef-type K+ transport systems, predicted NAD-binding component.	N-acetyltransferase, GNAT family.	0.590
TSIB_0833	TSIB_1568	TSIB_0833	TSIB_1568	Kef-type K+ transport systems, predicted NAD-binding component.	Predicted ATPase.	0.617
TSIB_0833	TSIB_1966	TSIB_0833	TSIB_1966	Kef-type K+ transport systems, predicted NAD-binding component.	Transcriptional regulatory protein, arsR family.	0.564
TSIB_0833	TSIB_1968	TSIB_0833	TSIB_1968	Kef-type K+ transport systems, predicted NAD-binding component.	ArsR family transcriptional regulator.	0.523
TSIB_1072	TSIB_0833	TSIB_1072	TSIB_0833	N-acetyltransferase, GNAT family.	Kef-type K+ transport systems, predicted NAD-binding component.	0.590
TSIB_1072	TSIB_1966	TSIB_1072	TSIB_1966	N-acetyltransferase, GNAT family.	Transcriptional regulatory protein, arsR family.	0.487
TSIB_1072	TSIB_1968	TSIB_1072	TSIB_1968	N-acetyltransferase, GNAT family.	ArsR family transcriptional regulator.	0.613
TSIB_1425	TSIB_1966	TSIB_1425	TSIB_1966	Predicted transcription regulator, Lrp/AsnC family.	Transcriptional regulatory protein, arsR family.	0.432
TSIB_1568	TSIB_0830	TSIB_1568	TSIB_0830	Predicted ATPase.	N-acetyltransferase.	0.469
TSIB_1568	TSIB_0833	TSIB_1568	TSIB_0833	Predicted ATPase.	Kef-type K+ transport systems, predicted NAD-binding component.	0.617
TSIB_1568	TSIB_1966	TSIB_1568	TSIB_1966	Predicted ATPase.	Transcriptional regulatory protein, arsR family.	0.428
TSIB_1965	TSIB_1966	TSIB_1965	TSIB_1966	Succinyl-coa synthetase alpha subunit related protein.	Transcriptional regulatory protein, arsR family.	0.823
TSIB_1965	TSIB_1967	TSIB_1965	TSIB_1967	Succinyl-coa synthetase alpha subunit related protein.	Hypothetical protein.	0.774
TSIB_1965	TSIB_1968	TSIB_1965	TSIB_1968	Succinyl-coa synthetase alpha subunit related protein.	ArsR family transcriptional regulator.	0.774

page 1 of 3

Server load: low (18%) [HD]

Permalink

Network

Neighborhood

Textmining

Cooccurrence

Experiments

Coexpression

Databases

Fusion

© STRING Consortium 2026

Credits

Access

Info

About