STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TSIB_1983Daunorubicin resistance ATP-binding protein DrrA. (311 aa)    
Predicted Functional Partners:
TSIB_1982
Daunorubicin resistance ABC transporter membrane protein.
 
  
 0.896
TSIB_0212
Transcription regulator, PadR-like family.
 
    0.809
TSIB_1984
Hypothetical protein.
  
  
 0.793
TSIB_0214
ABC-type multidrug transport system, permease component.
 
  
 0.762
TSIB_1985
Hypothetical protein.
       0.714
TSIB_0141
Daunorubicin resistance ATP-binding protein.
  
     0.700
TSIB_0220
Fructose-1,6-bisphosphate aldolase (FBA).
 
    
0.679
TSIB_0256
MATE efflux family protein.
  
  
 0.578
TSIB_0273
Sodium-driven multidrug efflux pump protein.
  
  
 0.578
TSIB_1728
MatE family member protein.
  
  
 0.578
Your Current Organism:
Thermococcus sibiricus
NCBI taxonomy Id: 604354
Other names: T. sibiricus MM 739, Thermococcus sibiricus MM 739, Thermococcus sibiricus str. MM 739, Thermococcus sibiricus strain MM 739
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.