STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSIB_2014UDP-or dTTP-glucose 4-epimerase or 4-6-dehydratase. (317 aa)    
Predicted Functional Partners:
TSIB_2017
Sugar-phosphate nucleotydyltransferase.
 
 0.983
TSIB_1312
Sugar-phosphate nucleotydyltransferase.
 
 0.922
TSIB_0579
Putative galactose-1-phosphate uridylyltransferase.
  
 
 0.918
TSIB_0649
UDP-glucose 4-epimerase.
 
  
 
0.916
TSIB_0150
Nucleotidyl transferase family.
 
 0.914
TSIB_0504
NDP-sugar synthase.
 
 0.913
TSIB_2044
Glucose-1-phosphate thymidylyltransferase.
 
 
 0.896
rps3
30S ribosomal protein S3P; Binds the lower part of the 30S subunit head. Belongs to the universal ribosomal protein uS3 family.
  
 0.871
rps28e
30S ribosomal protein S28e; Belongs to the eukaryotic ribosomal protein eS28 family.
  
 0.868
rps24e
30S ribosomal protein S24e; Belongs to the eukaryotic ribosomal protein eS24 family.
  
 0.859
Your Current Organism:
Thermococcus sibiricus
NCBI taxonomy Id: 604354
Other names: T. sibiricus MM 739, Thermococcus sibiricus MM 739, Thermococcus sibiricus str. MM 739, Thermococcus sibiricus strain MM 739
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.