STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSIB_2018Capsular polysaccharide biosynthesis protein. (414 aa)    
Predicted Functional Partners:
TSIB_2045
RfbB dTDP-glucose 4,6-dehydratase.
  
  
 0.800
TSIB_2044
Glucose-1-phosphate thymidylyltransferase.
  
  
 0.798
TSIB_2047
RfbC dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
  
  
 0.798
TSIB_2017
Sugar-phosphate nucleotydyltransferase.
  
  
 0.727
TSIB_0855
Glycosyl transferase.
 
  
 0.684
TSIB_2021
Glycosyl transferase.
 
  
 0.673
TSIB_2061
Glycosyl transferase, group 1.
 
  
 0.663
TSIB_2014
UDP-or dTTP-glucose 4-epimerase or 4-6-dehydratase.
 
  
 0.648
TSIB_1409
Glycosyltransferase, family 4.
 
  
 0.642
TSIB_2015
Nucleotidyltransferase.
       0.636
Your Current Organism:
Thermococcus sibiricus
NCBI taxonomy Id: 604354
Other names: T. sibiricus MM 739, Thermococcus sibiricus MM 739, Thermococcus sibiricus str. MM 739, Thermococcus sibiricus strain MM 739
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.