STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TASK_LOCUS1727E3 ubiquitin-protein ligase; E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates. (412 aa)    
Predicted Functional Partners:
TASK_LOCUS1689
Uncharacterized protein.
    
 0.879
TASK_LOCUS8627
Uncharacterized protein.
    
  0.856
TASK_LOCUS6558
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
   0.635
TASK_LOCUS175
Uncharacterized protein.
    
 0.613
TASK_LOCUS2199
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.613
TASK_LOCUS9207
Uncharacterized protein.
    
 0.609
TASK_LOCUS3466
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.567
TASK_LOCUS5201
Uncharacterized protein.
    
 0.563
TASK_LOCUS2926
USP domain-containing protein; Belongs to the peptidase C19 family.
    
  0.546
A0A0R3W006
Uncharacterized protein.
    
  0.546
Your Current Organism:
Taenia asiatica
NCBI taxonomy Id: 60517
Other names: Asian tapeworm, T. asiatica, Taenia saginata asiatica
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