TASK_LOCUS5623 protein (Taenia asiatica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

TASK_LOCUS5623

Uncharacterized protein. (796 aa)

Predicted Functional Partners:

TASK_LOCUS376

0.903

TASK_LOCUS8620

0.744

TASK_LOCUS6390

0.723

A0A0R3W733

0.718

TASK_LOCUS3550

0.689

TASK_LOCUS7575

0.689

TASK_LOCUS8464

0.689

TASK_LOCUS3621

0.682

TASK_LOCUS1982

0.680

TASK_LOCUS4198

0.680

Your Current Organism:

Taenia asiatica

NCBI taxonomy Id: 60517
Other names: Asian tapeworm, T. asiatica, Taenia saginata asiatica

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A0R3W733	TASK_LOCUS1982	A0A0R3W733	A0A0R3VX37	Protein kinase domain-containing protein.	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.	0.692
A0A0R3W733	TASK_LOCUS3550	A0A0R3W733	A0A0R3W1E4	Protein kinase domain-containing protein.	RING-type domain-containing protein.	0.872
A0A0R3W733	TASK_LOCUS376	A0A0R3W733	A0A158R6K2	Protein kinase domain-containing protein.	Uncharacterized protein.	0.999
A0A0R3W733	TASK_LOCUS4198	A0A0R3W733	A0A0R3W2V8	Protein kinase domain-containing protein.	Uncharacterized protein.	0.692
A0A0R3W733	TASK_LOCUS5623	A0A0R3W733	A0A0R3W629	Protein kinase domain-containing protein.	Uncharacterized protein.	0.718
A0A0R3W733	TASK_LOCUS7575	A0A0R3W733	A0A0R3WAI8	Protein kinase domain-containing protein.	PDZ domain-containing protein.	0.872
A0A0R3W733	TASK_LOCUS8464	A0A0R3W733	A0A158RA51	Protein kinase domain-containing protein.	Uncharacterized protein.	0.837
A0A0R3W733	TASK_LOCUS8620	A0A0R3W733	A0A158RA79	Protein kinase domain-containing protein.	Uncharacterized protein.	0.898
TASK_LOCUS1982	A0A0R3W733	A0A0R3VX37	A0A0R3W733	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.	Protein kinase domain-containing protein.	0.692
TASK_LOCUS1982	TASK_LOCUS3550	A0A0R3VX37	A0A0R3W1E4	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.	RING-type domain-containing protein.	0.664
TASK_LOCUS1982	TASK_LOCUS376	A0A0R3VX37	A0A158R6K2	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.	Uncharacterized protein.	0.696
TASK_LOCUS1982	TASK_LOCUS5623	A0A0R3VX37	A0A0R3W629	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.	Uncharacterized protein.	0.680
TASK_LOCUS1982	TASK_LOCUS7575	A0A0R3VX37	A0A0R3WAI8	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.	PDZ domain-containing protein.	0.664
TASK_LOCUS1982	TASK_LOCUS8464	A0A0R3VX37	A0A158RA51	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.	Uncharacterized protein.	0.717
TASK_LOCUS1982	TASK_LOCUS8620	A0A0R3VX37	A0A158RA79	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.	Uncharacterized protein.	0.598
TASK_LOCUS3550	A0A0R3W733	A0A0R3W1E4	A0A0R3W733	RING-type domain-containing protein.	Protein kinase domain-containing protein.	0.872
TASK_LOCUS3550	TASK_LOCUS1982	A0A0R3W1E4	A0A0R3VX37	RING-type domain-containing protein.	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.	0.664
TASK_LOCUS3550	TASK_LOCUS376	A0A0R3W1E4	A0A158R6K2	RING-type domain-containing protein.	Uncharacterized protein.	0.979
TASK_LOCUS3550	TASK_LOCUS4198	A0A0R3W1E4	A0A0R3W2V8	RING-type domain-containing protein.	Uncharacterized protein.	0.664
TASK_LOCUS3550	TASK_LOCUS5623	A0A0R3W1E4	A0A0R3W629	RING-type domain-containing protein.	Uncharacterized protein.	0.689