STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TASK_LOCUS8394Uncharacterized protein; Belongs to the DEAD box helicase family. (789 aa)    
Predicted Functional Partners:
TASK_LOCUS3702
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.
   
 0.898
TASK_LOCUS8523
CP-type G domain-containing protein.
  
 0.867
TASK_LOCUS7612
Uncharacterized protein.
  
 0.858
TASK_LOCUS749
Uncharacterized protein.
    
 0.834
TASK_LOCUS9271
Uncharacterized protein.
   
 0.826
TASK_LOCUS7418
RRM domain-containing protein.
   
 0.815
TASK_LOCUS9635
PUA domain-containing protein.
  
 
 0.811
TASK_LOCUS7059
WD_REPEATS_REGION domain-containing protein.
   
 0.804
TASK_LOCUS4521
Methyltransf_25 domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.
  
 0.786
TASK_LOCUS8412
SF3b1 domain-containing protein.
   
 0.786
Your Current Organism:
Taenia asiatica
NCBI taxonomy Id: 60517
Other names: Asian tapeworm, T. asiatica, Taenia saginata asiatica
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