Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BG61_28205 | BG61_28750 | GCA_000751215_02594 | GCA_000751215_02380 | Unannotated protein. | Unannotated protein; HflC and HflK could encode or regulate a protease. | 0.616 |
BG61_28205 | BG61_33250 | GCA_000751215_02594 | GCA_000751215_00040 | Unannotated protein. | Unannotated protein. | 0.616 |
BG61_28205 | BG61_35015 | GCA_000751215_02594 | GCA_000751215_05745 | Unannotated protein. | Unannotated protein. | 0.432 |
BG61_28750 | BG61_28205 | GCA_000751215_02380 | GCA_000751215_02594 | Unannotated protein; HflC and HflK could encode or regulate a protease. | Unannotated protein. | 0.616 |
BG61_28750 | BG61_33250 | GCA_000751215_02380 | GCA_000751215_00040 | Unannotated protein; HflC and HflK could encode or regulate a protease. | Unannotated protein. | 0.982 |
BG61_28750 | BG61_35015 | GCA_000751215_02380 | GCA_000751215_05745 | Unannotated protein; HflC and HflK could encode or regulate a protease. | Unannotated protein. | 0.429 |
BG61_28750 | bamB | GCA_000751215_02380 | GCA_000751215_02384 | Unannotated protein; HflC and HflK could encode or regulate a protease. | Unannotated protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.546 |
BG61_28750 | ftsH | GCA_000751215_02380 | GCA_000751215_00489 | Unannotated protein; HflC and HflK could encode or regulate a protease. | Unannotated protein; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. | 0.996 |
BG61_28750 | yidC | GCA_000751215_02380 | GCA_000751215_03494 | Unannotated protein; HflC and HflK could encode or regulate a protease. | Unannotated protein; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins. | 0.797 |
BG61_33245 | BG61_33250 | GCA_000751215_00041 | GCA_000751215_00040 | Unannotated protein. | Unannotated protein. | 0.594 |
BG61_33245 | BG61_33255 | GCA_000751215_00041 | GCA_000751215_00039 | Unannotated protein. | Unannotated protein. | 0.428 |
BG61_33250 | BG61_28205 | GCA_000751215_00040 | GCA_000751215_02594 | Unannotated protein. | Unannotated protein. | 0.616 |
BG61_33250 | BG61_28750 | GCA_000751215_00040 | GCA_000751215_02380 | Unannotated protein. | Unannotated protein; HflC and HflK could encode or regulate a protease. | 0.982 |
BG61_33250 | BG61_33245 | GCA_000751215_00040 | GCA_000751215_00041 | Unannotated protein. | Unannotated protein. | 0.594 |
BG61_33250 | BG61_33255 | GCA_000751215_00040 | GCA_000751215_00039 | Unannotated protein. | Unannotated protein. | 0.542 |
BG61_33250 | BG61_33295 | GCA_000751215_00040 | GCA_000751215_00033 | Unannotated protein. | Unannotated protein. | 0.613 |
BG61_33250 | BG61_35015 | GCA_000751215_00040 | GCA_000751215_05745 | Unannotated protein. | Unannotated protein. | 0.575 |
BG61_33250 | bamB | GCA_000751215_00040 | GCA_000751215_02384 | Unannotated protein. | Unannotated protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.474 |
BG61_33250 | engB | GCA_000751215_00040 | GCA_000751215_02622 | Unannotated protein. | Unannotated protein; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family. | 0.520 |
BG61_33250 | ftsH | GCA_000751215_00040 | GCA_000751215_00489 | Unannotated protein. | Unannotated protein; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. | 0.987 |
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