Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BG61_11745 | BG61_30375 | GCA_000751215_00956 | GCA_000751215_05059 | Unannotated protein. | Unannotated protein. | 0.720 |
BG61_11745 | BG61_34730 | GCA_000751215_00956 | GCA_000751215_05802 | Unannotated protein. | Unannotated protein. | 0.844 |
BG61_11745 | BG61_36100 | GCA_000751215_00956 | GCA_000751215_02083 | Unannotated protein. | Unannotated protein. | 0.996 |
BG61_11745 | BG61_36155 | GCA_000751215_00956 | GCA_000751215_02093 | Unannotated protein. | Unannotated protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. | 0.936 |
BG61_11745 | BG61_39225 | GCA_000751215_00956 | GCA_000751215_05725 | Unannotated protein. | Unannotated protein. | 0.881 |
BG61_11745 | carA | GCA_000751215_00956 | GCA_000751215_00495 | Unannotated protein. | Unannotated protein; Belongs to the CarA family. | 0.954 |
BG61_11745 | carB | GCA_000751215_00956 | GCA_000751215_00494 | Unannotated protein. | Unannotated protein; Belongs to the CarB family. | 0.957 |
BG61_11745 | pyrD | GCA_000751215_00956 | GCA_000751215_02427 | Unannotated protein. | Unannotated protein; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.989 |
BG61_11745 | pyrE | GCA_000751215_00956 | GCA_000751215_00287 | Unannotated protein. | Unannotated protein; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.969 |
BG61_11745 | pyrF | GCA_000751215_00956 | GCA_000751215_01337 | Unannotated protein. | Unannotated protein; Belongs to the OMP decarboxylase family. Type 2 subfamily. | 0.961 |
BG61_30375 | BG61_11745 | GCA_000751215_05059 | GCA_000751215_00956 | Unannotated protein. | Unannotated protein. | 0.720 |
BG61_30375 | BG61_34730 | GCA_000751215_05059 | GCA_000751215_05802 | Unannotated protein. | Unannotated protein. | 0.720 |
BG61_30375 | BG61_36100 | GCA_000751215_05059 | GCA_000751215_02083 | Unannotated protein. | Unannotated protein. | 0.822 |
BG61_30375 | BG61_36155 | GCA_000751215_05059 | GCA_000751215_02093 | Unannotated protein. | Unannotated protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. | 0.961 |
BG61_30375 | BG61_39225 | GCA_000751215_05059 | GCA_000751215_05725 | Unannotated protein. | Unannotated protein. | 0.882 |
BG61_30375 | carA | GCA_000751215_05059 | GCA_000751215_00495 | Unannotated protein. | Unannotated protein; Belongs to the CarA family. | 0.933 |
BG61_30375 | carB | GCA_000751215_05059 | GCA_000751215_00494 | Unannotated protein. | Unannotated protein; Belongs to the CarB family. | 0.927 |
BG61_30375 | pyrD | GCA_000751215_05059 | GCA_000751215_02427 | Unannotated protein. | Unannotated protein; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.787 |
BG61_30375 | pyrE | GCA_000751215_05059 | GCA_000751215_00287 | Unannotated protein. | Unannotated protein; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.941 |
BG61_30375 | pyrF | GCA_000751215_05059 | GCA_000751215_01337 | Unannotated protein. | Unannotated protein; Belongs to the OMP decarboxylase family. Type 2 subfamily. | 0.939 |
page 1 of 6