STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BG61_08335Unannotated protein. (460 aa)    
Predicted Functional Partners:
BG61_15200
Unannotated protein.
 
 0.919
BG61_35015
Unannotated protein.
   
 0.846
BG61_24815
Unannotated protein.
  
  
  0.835
ssuD
Unannotated protein; Catalyzes the desulfonation of aliphatic sulfonates. Belongs to the SsuD family.
  
  
  0.835
BG61_08325
Unannotated protein.
  
 
 0.806
BG61_08315
Unannotated protein.
 
 
  0.805
BG61_08305
Unannotated protein.
    0.774
BG61_08310
Unannotated protein.
 
  0.739
BG61_14665
Unannotated protein.
 
 
  0.736
BG61_08320
Unannotated protein.
 
 
  0.733
Your Current Organism:
Caballeronia glathei
NCBI taxonomy Id: 60547
Other names: ATCC 29195, Burkholderia glathei, C. glathei, CFBP 4791, CIP 105421, DSM 50014, JCM 10563, LMG 14190, LMG:14190, Paraburkholderia glathei, Pseudomonas glathei, strain N 15, strain N15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.