STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BG61_12190Unannotated protein. (377 aa)    
Predicted Functional Partners:
BG61_29995
Unannotated protein.
  
     0.706
BG61_32340
Unannotated protein.
  
     0.705
BG61_02300
Unannotated protein.
  
 
   0.688
BG61_30190
Unannotated protein.
  
     0.675
BG61_23910
Unannotated protein.
  
     0.639
BG61_37065
Unannotated protein.
  
     0.632
BG61_33825
Unannotated protein.
  
     0.625
BG61_15105
Unannotated protein.
  
     0.614
BG61_12725
Unannotated protein.
  
     0.601
BG61_32390
Unannotated protein.
  
     0.584
Your Current Organism:
Caballeronia glathei
NCBI taxonomy Id: 60547
Other names: ATCC 29195, Burkholderia glathei, C. glathei, CFBP 4791, CIP 105421, DSM 50014, JCM 10563, LMG 14190, LMG:14190, Paraburkholderia glathei, Pseudomonas glathei, strain N 15, strain N15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.