STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BG61_24915Unannotated protein. (141 aa)    
Predicted Functional Partners:
rbcL
Unannotated protein; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO large chain family. Type I subfamily.
 
 0.993
BG61_30445
Unannotated protein; Belongs to the RuBisCO large chain family.
 
 0.989
BG61_34975
Unannotated protein; Belongs to the RuBisCO large chain family.
 
 0.989
BG61_24900
Unannotated protein.
 
 
 0.984
BG61_24910
Unannotated protein.
 
  
 0.969
BG61_08985
Unannotated protein.
 
 
 0.962
BG61_38360
Unannotated protein.
    
 
 0.927
BG61_34030
Unannotated protein; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
    
 0.911
BG61_21790
Unannotated protein; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
    
 0.911
BG61_09255
Unannotated protein.
    
 0.911
Your Current Organism:
Caballeronia glathei
NCBI taxonomy Id: 60547
Other names: ATCC 29195, Burkholderia glathei, C. glathei, CFBP 4791, CIP 105421, DSM 50014, JCM 10563, LMG 14190, LMG:14190, Paraburkholderia glathei, Pseudomonas glathei, strain N 15, strain N15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.