STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BG61_35935Unannotated protein. (417 aa)    
Predicted Functional Partners:
BG61_38490
Unannotated protein; A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters.
  
 0.999
BG61_22115
Unannotated protein.
    
   0.905
BG61_19555
Unannotated protein.
    
   0.905
BG61_16445
Unannotated protein.
    
   0.905
iscS
Unannotated protein; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins.
    
0.800
BG61_23285
Unannotated protein.
  
 
 0.759
BG61_36880
Unannotated protein.
  
 
 0.752
BG61_31845
Unannotated protein.
  
 
 0.752
BG61_09960
Unannotated protein.
  
 
 0.752
selD
Unannotated protein; Synthesizes selenophosphate from selenide and ATP.
    
 0.751
Your Current Organism:
Caballeronia glathei
NCBI taxonomy Id: 60547
Other names: ATCC 29195, Burkholderia glathei, C. glathei, CFBP 4791, CIP 105421, DSM 50014, JCM 10563, LMG 14190, LMG:14190, Paraburkholderia glathei, Pseudomonas glathei, strain N 15, strain N15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.