STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BG61_36075Unannotated protein. (267 aa)    
Predicted Functional Partners:
BG61_36070
Unannotated protein.
 
 
 0.982
hutI
Unannotated protein.
  
 0.945
BG61_36065
Unannotated protein.
 
    0.906
BG61_36060
Unannotated protein.
 
 
 0.851
hutU
Unannotated protein; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate.
 
  
 0.828
hutH
Unannotated protein.
 
  
 0.817
putA
Unannotated protein; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
     
 0.713
BG61_21780
Unannotated protein.
  
  
 0.710
BG61_19885
Unannotated protein.
  
  
 0.710
BG61_22095
Unannotated protein.
    
  0.704
Your Current Organism:
Caballeronia glathei
NCBI taxonomy Id: 60547
Other names: ATCC 29195, Burkholderia glathei, C. glathei, CFBP 4791, CIP 105421, DSM 50014, JCM 10563, LMG 14190, LMG:14190, Paraburkholderia glathei, Pseudomonas glathei, strain N 15, strain N15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.