STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BG61_35660Unannotated protein; Belongs to the binding-protein-dependent transport system permease family. (347 aa)    
Predicted Functional Partners:
BG61_35670
Unannotated protein.
  0.992
BG61_35675
Unannotated protein; Belongs to the binding-protein-dependent transport system permease family.
  
 
0.961
BG61_35665
Unannotated protein.
 
  0.944
rbsA-3
Unannotated protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 
  0.878
BG61_31285
Unannotated protein.
 
  0.873
BG61_10505
Unannotated protein.
 
  0.873
xylG
Unannotated protein; Part of the ABC transporter complex XylFGH involved in xylose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Xylose importer (TC 3.A.1.2.4) family.
 
  0.873
BG61_32940
Unannotated protein.
  
  0.867
BG61_17925
Unannotated protein.
 
  0.864
BG61_36965
Unannotated protein.
 
  0.862
Your Current Organism:
Caballeronia glathei
NCBI taxonomy Id: 60547
Other names: ATCC 29195, Burkholderia glathei, C. glathei, CFBP 4791, CIP 105421, DSM 50014, JCM 10563, LMG 14190, LMG:14190, Paraburkholderia glathei, Pseudomonas glathei, strain N 15, strain N15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.