Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BG61_09210 | BG61_12890 | GCA_000751215_05419 | GCA_000751215_00732 | Unannotated protein; Belongs to the amidase family. | Unannotated protein. | 0.672 |
BG61_09210 | BG61_13160 | GCA_000751215_05419 | GCA_000751215_04506 | Unannotated protein; Belongs to the amidase family. | Unannotated protein; Belongs to the amidase family. | 0.628 |
BG61_09210 | BG61_22285 | GCA_000751215_05419 | GCA_000751215_00335 | Unannotated protein; Belongs to the amidase family. | Unannotated protein. | 0.700 |
BG61_09210 | BG61_27150 | GCA_000751215_05419 | GCA_000751215_03651 | Unannotated protein; Belongs to the amidase family. | Unannotated protein. | 0.657 |
BG61_09210 | BG61_41000 | GCA_000751215_05419 | GCA_000751215_01046 | Unannotated protein; Belongs to the amidase family. | Unannotated protein. | 0.615 |
BG61_09210 | gatB | GCA_000751215_05419 | GCA_000751215_03445 | Unannotated protein; Belongs to the amidase family. | Unannotated protein; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily. | 0.989 |
BG61_09210 | gatC | GCA_000751215_05419 | GCA_000751215_03447 | Unannotated protein; Belongs to the amidase family. | Unannotated protein; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family. | 0.974 |
BG61_09210 | glnS | GCA_000751215_05419 | GCA_000751215_00457 | Unannotated protein; Belongs to the amidase family. | Unannotated protein. | 0.769 |
BG61_09210 | gltX | GCA_000751215_05419 | GCA_000751215_05610 | Unannotated protein; Belongs to the amidase family. | Unannotated protein; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily. | 0.631 |
BG61_09210 | gluQ | GCA_000751215_05419 | GCA_000751215_06573 | Unannotated protein; Belongs to the amidase family. | Unannotated protein; Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5-dihydroxy-2- cyclopenten-1-yl) moiety of the queuosine in the wobble position of the QUC anticodon; Belongs to the class-I aminoacyl-tRNA synthetase family. GluQ subfamily. | 0.626 |
BG61_12890 | BG61_09210 | GCA_000751215_00732 | GCA_000751215_05419 | Unannotated protein. | Unannotated protein; Belongs to the amidase family. | 0.672 |
BG61_12890 | BG61_13160 | GCA_000751215_00732 | GCA_000751215_04506 | Unannotated protein. | Unannotated protein; Belongs to the amidase family. | 0.674 |
BG61_12890 | BG61_27150 | GCA_000751215_00732 | GCA_000751215_03651 | Unannotated protein. | Unannotated protein. | 0.674 |
BG61_12890 | BG61_41000 | GCA_000751215_00732 | GCA_000751215_01046 | Unannotated protein. | Unannotated protein. | 0.674 |
BG61_13160 | BG61_09210 | GCA_000751215_04506 | GCA_000751215_05419 | Unannotated protein; Belongs to the amidase family. | Unannotated protein; Belongs to the amidase family. | 0.628 |
BG61_13160 | BG61_12890 | GCA_000751215_04506 | GCA_000751215_00732 | Unannotated protein; Belongs to the amidase family. | Unannotated protein. | 0.674 |
BG61_13160 | BG61_27150 | GCA_000751215_04506 | GCA_000751215_03651 | Unannotated protein; Belongs to the amidase family. | Unannotated protein. | 0.679 |
BG61_13160 | BG61_41000 | GCA_000751215_04506 | GCA_000751215_01046 | Unannotated protein; Belongs to the amidase family. | Unannotated protein. | 0.596 |
BG61_13160 | gatB | GCA_000751215_04506 | GCA_000751215_03445 | Unannotated protein; Belongs to the amidase family. | Unannotated protein; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily. | 0.995 |
BG61_13160 | gatC | GCA_000751215_04506 | GCA_000751215_03447 | Unannotated protein; Belongs to the amidase family. | Unannotated protein; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family. | 0.986 |
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