STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BG61_13680Unannotated protein. (586 aa)    
Predicted Functional Partners:
GCA_000751215_00036
Unannotated protein.
 
  
 0.908
BG61_35015
Unannotated protein.
 
  
 0.900
BG61_14075
Unannotated protein.
 
  
 0.894
BG61_13700
Unannotated protein.
 
  
 0.859
BG61_33235
Unannotated protein.
 
  
 0.851
BG61_13710
Unannotated protein.
 
  
 0.830
BG61_13645
Unannotated protein.
 
  
 0.818
GCA_000751215_05743
Unannotated protein.
 
  
 0.817
BG61_33290
Unannotated protein.
 
  
 0.797
BG61_13690
Unannotated protein; Belongs to the ATP-dependent AMP-binding enzyme family.
 
  
 0.792
Your Current Organism:
Caballeronia glathei
NCBI taxonomy Id: 60547
Other names: ATCC 29195, Burkholderia glathei, C. glathei, CFBP 4791, CIP 105421, DSM 50014, JCM 10563, LMG 14190, LMG:14190, Paraburkholderia glathei, Pseudomonas glathei, strain N 15, strain N15
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.