STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BG61_09990Unannotated protein. (167 aa)    
Predicted Functional Partners:
GCA_000751215_02369
Unannotated protein.
   
 
 0.787
BG61_29310
Unannotated protein.
   
 
 0.603
BG61_38315
Unannotated protein.
   
 
 0.603
GCA_000751215_00773
Unannotated protein.
    
 
 0.529
bamA
Unannotated protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
    
 
 0.529
bamA-2
Unannotated protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
    
 
 0.529
bamB
Unannotated protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
    
 
 0.507
BG61_06300
Unannotated protein.
    
 
 0.507
BG61_30785
Unannotated protein; Hydrolysis of phosphatidylcholine with phospholipase A2 (EC 3.1.1.4) and phospholipase A1 (EC 3.1.1.32) activities. Belongs to the phospholipase A1 family.
    
   0.446
BG61_09985
Unannotated protein.
       0.412
Your Current Organism:
Caballeronia glathei
NCBI taxonomy Id: 60547
Other names: ATCC 29195, Burkholderia glathei, C. glathei, CFBP 4791, CIP 105421, DSM 50014, JCM 10563, LMG 14190, LMG:14190, Paraburkholderia glathei, Pseudomonas glathei, strain N 15, strain N15
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.