STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIN78037.1Anaerobic selenocysteine-containing dehydrogenase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (695 aa)    
Predicted Functional Partners:
SIO53939.1
Fe-S-cluster-containing dehydrogenase component.
 
 0.979
SIO50692.1
Formate dehydrogenase (quinone-dependent) iron-sulfur subunit.
 
 0.976
SIN79236.1
Glutamate synthase (NADH) large subunit.
  
 0.924
SIO48553.1
Citrate/tricarballylate utilization protein.
  
 0.901
SIN78766.1
Ubiquinol-cytochrome c reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
   
 0.880
SIO50697.1
Formate dehydrogenase subunit gamma.
  
 0.857
SIN88074.1
Cytochrome c, mono-and diheme variants.
  
 0.844
SIO11435.1
Formylmethanofuran dehydrogenase, subunit A.
  
 0.839
SIN86917.1
Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
  
 0.833
SIO18608.1
Cytochrome c, mono-and diheme variants.
  
 0.797
Your Current Organism:
Paraburkholderia phenazinium
NCBI taxonomy Id: 60549
Other names: ATCC 33666, BCRC 17398, Burkholderia phenazinium, CCUG 20836, CCUG 46044, CFBP 4793, CIP 106502, DSM 10684, JCM 10564, LMG 2247, LMG:2247, NCIB 11027, NCIB:11027, NCIMB 11027, P. phenazinium, Pseudomonas phenazinium
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