STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIN95448.1Hypothetical protein. (236 aa)    
Predicted Functional Partners:
SIN95421.1
Hypothetical protein.
 
 
   0.916
SIN95479.1
Hypothetical protein.
 
     0.900
SIN95434.1
Hypothetical protein.
       0.809
SIN81409.1
Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
    
   0.804
SIN95461.1
Hypothetical protein.
       0.612
SIO56828.1
Lipoprotein NlpD.
   
   0.587
SIN95493.1
Hypothetical protein.
       0.513
SIN81807.1
Uncharacterized conserved protein.
  
     0.488
SIN96784.1
Membrane-bound lytic murein transglycosylase D.
    
   0.487
SIO17038.1
PelD GGDEF domain-containing protein.
  
     0.462
Your Current Organism:
Paraburkholderia phenazinium
NCBI taxonomy Id: 60549
Other names: ATCC 33666, BCRC 17398, Burkholderia phenazinium, CCUG 20836, CCUG 46044, CFBP 4793, CIP 106502, DSM 10684, JCM 10564, LMG 2247, LMG:2247, NCIB 11027, NCIB:11027, NCIMB 11027, P. phenazinium, Pseudomonas phenazinium
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.