STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIN98206.1NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. (258 aa)    
Predicted Functional Partners:
SIO49474.1
Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein.
  
 0.762
SIN80867.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
  
     0.692
SIN91402.1
CDP-4-dehydro-6-deoxyglucose reductase.
  
 0.678
SIO08690.1
Benzoate/toluate 1,2-dioxygenase reductase subunit.
  
 0.678
SIO18676.1
Toluene monooxygenase electron transfer component.
  
 0.678
SIO54212.1
CDP-4-dehydro-6-deoxyglucose reductase.
  
 0.678
SIN98220.1
(3S)-malyl-CoA thioesterase.
   
  0.668
SIO14282.1
Thioesterase domain-containing protein.
  
 0.657
SIO49514.1
Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein.
  
 0.657
SIN79236.1
Glutamate synthase (NADH) large subunit.
     
 0.656
Your Current Organism:
Paraburkholderia phenazinium
NCBI taxonomy Id: 60549
Other names: ATCC 33666, BCRC 17398, Burkholderia phenazinium, CCUG 20836, CCUG 46044, CFBP 4793, CIP 106502, DSM 10684, JCM 10564, LMG 2247, LMG:2247, NCIB 11027, NCIB:11027, NCIMB 11027, P. phenazinium, Pseudomonas phenazinium
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