STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIO07218.1Hypothetical protein. (668 aa)    
Predicted Functional Partners:
SIO07231.1
Hypothetical protein.
 
     0.947
SIO07248.1
Hypothetical protein.
 
     0.871
SIO07693.1
Hypothetical protein.
 
     0.777
SIO41235.1
Hypothetical protein.
 
     0.777
SIO42599.1
Hypothetical protein.
 
     0.777
SIO42608.1
Hypothetical protein.
 
     0.777
SIO52609.1
Hypothetical protein.
 
     0.777
SIO52614.1
Hypothetical protein.
 
     0.777
SIO52618.1
Hypothetical protein.
 
     0.777
SIO07721.1
Hypothetical protein.
 
     0.776
Your Current Organism:
Paraburkholderia phenazinium
NCBI taxonomy Id: 60549
Other names: ATCC 33666, BCRC 17398, Burkholderia phenazinium, CCUG 20836, CCUG 46044, CFBP 4793, CIP 106502, DSM 10684, JCM 10564, LMG 2247, LMG:2247, NCIB 11027, NCIB:11027, NCIMB 11027, P. phenazinium, Pseudomonas phenazinium
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.