STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIO11369.1Amino acid kinase family protein. (196 aa)    
Predicted Functional Partners:
SIO11385.1
Probable H4MPT-linked C1 transfer pathway protein.
 
  
 0.994
SIO11397.1
Predicted ATP-dependent carboligase, ATP-grasp superfamily.
 
   
 0.945
SIO11409.1
Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; Belongs to the HisA/HisF family.
 
   
 0.901
SIO11435.1
Formylmethanofuran dehydrogenase, subunit A.
 
   
 0.859
SIO11353.1
Uncharacterized protein, UPF0264 family.
 
   
 0.851
SIO11421.1
Formylmethanofuran dehydrogenase, subunit B.
 
     0.845
ffsA
Formylmethanofuran--tetrahydromethanopterin formyltransferase; Catalyzes the transfer of a formyl group from 5-formyl tetrahydromethanopterin (5-formyl-H(4)MPT) to methanofuran (MFR) so as to produce formylmethanofuran (formyl-MFR) and tetrahydromethanopterin (H(4)MPT); Belongs to the FTR family.
 
     0.841
SIO11459.1
Formylmethanofuran dehydrogenase, subunit C.
 
     0.840
SIO11234.1
Dihydropteroate synthase-related protein.
 
   
 0.828
SIO11340.1
Hypothetical protein.
 
   
 0.816
Your Current Organism:
Paraburkholderia phenazinium
NCBI taxonomy Id: 60549
Other names: ATCC 33666, BCRC 17398, Burkholderia phenazinium, CCUG 20836, CCUG 46044, CFBP 4793, CIP 106502, DSM 10684, JCM 10564, LMG 2247, LMG:2247, NCIB 11027, NCIB:11027, NCIMB 11027, P. phenazinium, Pseudomonas phenazinium
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