STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIO22699.1Signal transduction histidine kinase. (400 aa)    
Predicted Functional Partners:
SIN89409.1
Response regulator receiver domain-containing protein.
 
 0.985
SIO06952.1
PAS domain S-box-containing protein.
0.980
SIO01345.1
Response regulator receiver domain-containing protein.
  
 0.959
SIO45819.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
  
0.957
SIO46443.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
  
0.957
SIO01625.1
Dihydrolipoamide dehydrogenase.
   
 0.954
SIN91592.1
PAS domain S-box-containing protein.
0.934
SIO49231.1
PAS domain S-box-containing protein.
 
 
0.929
SIO53987.1
Multi-sensor hybrid histidine kinase.
 
0.928
SIO22687.1
Response regulator receiver domain-containing protein.
 
  0.889
Your Current Organism:
Paraburkholderia phenazinium
NCBI taxonomy Id: 60549
Other names: ATCC 33666, BCRC 17398, Burkholderia phenazinium, CCUG 20836, CCUG 46044, CFBP 4793, CIP 106502, DSM 10684, JCM 10564, LMG 2247, LMG:2247, NCIB 11027, NCIB:11027, NCIMB 11027, P. phenazinium, Pseudomonas phenazinium
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