STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIO24623.13-phenylpropionate/cinnamic acid dioxygenase, small subunit. (160 aa)    
Predicted Functional Partners:
SIO24647.1
Ring hydroxylating alpha subunit (catalytic domain).
 
 0.980
SIO43640.1
Phenylpropionate dioxygenase, large terminal subunit.
 
 0.979
SIO46011.1
Anthranilate 1,2-dioxygenase large subunit.
 
 0.977
SIO08723.1
Benzoate 1,2-dioxygenase, alpha subunit.
 
 0.975
SIO49798.1
Vanillate O-demethylase monooxygenase subunit.
 
 0.933
SIO25030.1
Vanillate O-demethylase monooxygenase subunit.
 
 0.927
SIO47154.1
Phenylpropionate dioxygenase, large terminal subunit.
 
 0.920
SIO24635.1
Vanillate O-demethylase ferredoxin subunit.
 
 
 0.916
SIO45671.1
Vanillate O-demethylase monooxygenase subunit.
 
 0.912
SIO51322.1
Phenylpropionate dioxygenase, large terminal subunit.
 
 0.912
Your Current Organism:
Paraburkholderia phenazinium
NCBI taxonomy Id: 60549
Other names: ATCC 33666, BCRC 17398, Burkholderia phenazinium, CCUG 20836, CCUG 46044, CFBP 4793, CIP 106502, DSM 10684, JCM 10564, LMG 2247, LMG:2247, NCIB 11027, NCIB:11027, NCIMB 11027, P. phenazinium, Pseudomonas phenazinium
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