Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIN82131.1 | SIO25105.1 | SAMN05444168_0613 | SAMN05444168_3794 | L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | N-methylhydantoinase A. | 0.862 |
SIN82131.1 | SIO42508.1 | SAMN05444168_0613 | SAMN05444168_4263 | L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | N-methylhydantoinase B. | 0.858 |
SIN82131.1 | SIO42516.1 | SAMN05444168_0613 | SAMN05444168_4264 | L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | N-methylhydantoinase A. | 0.862 |
SIN82131.1 | SIO49707.1 | SAMN05444168_0613 | SAMN05444168_5545 | L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | N-methylhydantoinase A. | 0.862 |
SIN82131.1 | SIO53756.1 | SAMN05444168_0613 | SAMN05444168_6641 | L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | N-methylhydantoinase A. | 0.862 |
SIO25105.1 | SIN82131.1 | SAMN05444168_3794 | SAMN05444168_0613 | N-methylhydantoinase A. | L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 0.862 |
SIO25105.1 | SIO42508.1 | SAMN05444168_3794 | SAMN05444168_4263 | N-methylhydantoinase A. | N-methylhydantoinase B. | 0.996 |
SIO42438.1 | SIO42508.1 | SAMN05444168_4253 | SAMN05444168_4263 | 2-haloacid dehalogenase. | N-methylhydantoinase B. | 0.546 |
SIO42438.1 | SIO42523.1 | SAMN05444168_4253 | SAMN05444168_4265 | 2-haloacid dehalogenase. | Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily. | 0.443 |
SIO42438.1 | SIO42530.1 | SAMN05444168_4253 | SAMN05444168_4266 | 2-haloacid dehalogenase. | Peptide/nickel transport system permease protein. | 0.479 |
SIO42438.1 | SIO42536.1 | SAMN05444168_4253 | SAMN05444168_4267 | 2-haloacid dehalogenase. | Peptide/nickel transport system permease protein. | 0.471 |
SIO42502.1 | SIO42508.1 | SAMN05444168_4262 | SAMN05444168_4263 | Hypothetical protein. | N-methylhydantoinase B. | 0.664 |
SIO42502.1 | SIO42516.1 | SAMN05444168_4262 | SAMN05444168_4264 | Hypothetical protein. | N-methylhydantoinase A. | 0.646 |
SIO42502.1 | SIO42523.1 | SAMN05444168_4262 | SAMN05444168_4265 | Hypothetical protein. | Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily. | 0.630 |
SIO42502.1 | SIO42530.1 | SAMN05444168_4262 | SAMN05444168_4266 | Hypothetical protein. | Peptide/nickel transport system permease protein. | 0.629 |
SIO42502.1 | SIO42536.1 | SAMN05444168_4262 | SAMN05444168_4267 | Hypothetical protein. | Peptide/nickel transport system permease protein. | 0.469 |
SIO42508.1 | SIN82131.1 | SAMN05444168_4263 | SAMN05444168_0613 | N-methylhydantoinase B. | L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 0.858 |
SIO42508.1 | SIO25105.1 | SAMN05444168_4263 | SAMN05444168_3794 | N-methylhydantoinase B. | N-methylhydantoinase A. | 0.996 |
SIO42508.1 | SIO42438.1 | SAMN05444168_4263 | SAMN05444168_4253 | N-methylhydantoinase B. | 2-haloacid dehalogenase. | 0.546 |
SIO42508.1 | SIO42502.1 | SAMN05444168_4263 | SAMN05444168_4262 | N-methylhydantoinase B. | Hypothetical protein. | 0.664 |
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