STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIO44283.1FKBP-type peptidyl-prolyl cis-trans isomerase FkpA. (113 aa)    
Predicted Functional Partners:
htpG
Molecular chaperone HtpG; Molecular chaperone. Has ATPase activity.
   
 0.994
SIO43471.1
Hypothetical protein.
   
 
 0.987
SIN80485.1
Protein of unknown function DUF29.
    
 0.941
SIN94982.1
Protein of unknown function DUF29.
    
 0.941
SIN94996.1
Protein of unknown function DUF29.
    
 0.941
apaH
Bis(5'nucleosyl)-tetraphosphatase, ApaH; Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family.
    
 0.941
dinB
DNA polymerase-4; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.
    
 
 0.918
SIO20310.1
Protein ImuB.
    
 
 0.918
dnaK
Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.911
hscA
Molecular chaperone HscA; Chaperone involved in the maturation of iron-sulfur cluster- containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HscB.
  
 0.909
Your Current Organism:
Paraburkholderia phenazinium
NCBI taxonomy Id: 60549
Other names: ATCC 33666, BCRC 17398, Burkholderia phenazinium, CCUG 20836, CCUG 46044, CFBP 4793, CIP 106502, DSM 10684, JCM 10564, LMG 2247, LMG:2247, NCIB 11027, NCIB:11027, NCIMB 11027, P. phenazinium, Pseudomonas phenazinium
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