STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIO45102.1Phasin family protein. (164 aa)    
Predicted Functional Partners:
SIN98056.1
Uncharacterized membrane protein.
  
     0.754
SIO01576.1
PAS/PAC sensor signal transduction histidine kinase /multi-sensor signal transduction histidine kinase.
  
     0.746
SIO08958.1
Outer membrane protein (porin).
  
     0.697
SIO12715.1
Polyhydroxyalkanoate synthesis repressor PhaR.
 
   
 0.695
SIN89662.1
Protein of unknown function.
  
     0.685
SIO43939.1
Choline monooxygenase.
  
     0.685
SIO51106.1
Outer membrane protein (porin).
  
     0.673
SIO48345.1
Outer membrane protein (porin).
  
     0.661
SIO45957.1
Outer membrane protein (porin).
  
     0.659
SIN86125.1
Hypothetical protein.
  
     0.654
Your Current Organism:
Paraburkholderia phenazinium
NCBI taxonomy Id: 60549
Other names: ATCC 33666, BCRC 17398, Burkholderia phenazinium, CCUG 20836, CCUG 46044, CFBP 4793, CIP 106502, DSM 10684, JCM 10564, LMG 2247, LMG:2247, NCIB 11027, NCIB:11027, NCIMB 11027, P. phenazinium, Pseudomonas phenazinium
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