STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIO45957.1Outer membrane protein (porin). (366 aa)    
Predicted Functional Partners:
SIN83576.1
Thioredoxin.
  
 
   0.778
SIN94109.1
Uncharacterized integral membrane protein.
  
     0.719
SIO13012.1
4-amino-4-deoxy-L-arabinose transferase.
  
     0.717
SIO20875.1
Hypothetical protein.
  
     0.713
SIO44037.1
Hypothetical protein.
  
     0.710
SIO03801.1
ZipA, C-terminal FtsZ-binding domain; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins. Belongs to the ZipA family.
  
     0.695
SIO01641.1
Phasin family protein.
  
     0.670
SIN91845.1
Soluble lytic murein transglycosylase.
  
     0.668
SIO45102.1
Phasin family protein.
  
     0.659
SIN77829.1
Protein of unknown function.
  
     0.658
Your Current Organism:
Paraburkholderia phenazinium
NCBI taxonomy Id: 60549
Other names: ATCC 33666, BCRC 17398, Burkholderia phenazinium, CCUG 20836, CCUG 46044, CFBP 4793, CIP 106502, DSM 10684, JCM 10564, LMG 2247, LMG:2247, NCIB 11027, NCIB:11027, NCIMB 11027, P. phenazinium, Pseudomonas phenazinium
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