STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIO56830.1Mannose-6-phosphate isomerase, cupin superfamily. (136 aa)    
Predicted Functional Partners:
SIO10510.1
Putative colanic acid biosysnthesis UDP-glucose lipid carrier transferase.
  
 
 0.784
SIO17404.1
Undecaprenyl-phosphate glucose phosphotransferase.
  
 
 0.784
SIO56828.1
Lipoprotein NlpD.
       0.602
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
    
 0.532
SIO56835.1
Hypothetical protein.
       0.514
kynU
Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively.
    
  0.501
SIN97706.1
Transcriptional regulator, RpiR family.
  
  
  0.497
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.
     
 0.487
SIO57119.1
Amino acid ABC transporter substrate-binding protein, PAAT family.
  
     0.471
SIO53990.1
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
    
  0.469
Your Current Organism:
Paraburkholderia phenazinium
NCBI taxonomy Id: 60549
Other names: ATCC 33666, BCRC 17398, Burkholderia phenazinium, CCUG 20836, CCUG 46044, CFBP 4793, CIP 106502, DSM 10684, JCM 10564, LMG 2247, LMG:2247, NCIB 11027, NCIB:11027, NCIMB 11027, P. phenazinium, Pseudomonas phenazinium
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