STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TMEM170ATransmembrane protein 170A. (144 aa)    
Predicted Functional Partners:
BCAR1
BCAR1 scaffold protein, Cas family member.
      
 0.680
CFDP1
Craniofacial development protein 1; May play a role during embryogenesis.
      
 0.572
MCPH1
Microcephalin 1.
      
 0.562
LRIG2
Leucine rich repeats and immunoglobulin like domains 2.
      
 0.511
OSBPL3
Oxysterol-binding protein; Belongs to the OSBP family.
      
 0.485
NDC1
NDC1 transmembrane nucleoporin.
      
 0.476
NEDD9
Neural precursor cell expressed, developmentally down-regulated 9.
      
 0.474
ANKLE2
Ankyrin repeat and LEM domain containing 2.
      
 0.456
ZNF490
Uncharacterized protein.
      
 0.455
BIRC6
Baculoviral IAP repeat containing 6.
      
 0.450
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.