Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RAB30RAB30, member RAS oncogene family. (203 aa)    
Predicted Functional Partners:
COG4
Component of oligomeric golgi complex 4.
    
 0.886
CHM
Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane.
    
 0.837
COG2
Component of oligomeric golgi complex 2.
     
 0.834
COG5
Component of oligomeric golgi complex 5.
     
 0.823
COG8
Uncharacterized protein.
     
 0.818
COG6
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
     
 0.775
COG1
Component of oligomeric golgi complex 1.
     
 0.766
COG7
Component of oligomeric golgi complex 7.
     
 0.726
AVL9
AVL9 cell migration associated.
      
 0.701
COG3
Component of oligomeric golgi complex 3.
     
 0.682
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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