STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PPEF2Serine/threonine-protein phosphatase with EF-hands. (757 aa)    
Predicted Functional Partners:
NRSN1
Neurensin 1.
  
  
 0.927
RHO
Rhodopsin.
   
 0.804
EFCAB3
EF-hand calcium binding domain 3.
   
 0.569
CCNG2
Cyclin G2; Belongs to the cyclin family.
    
 0.547
GUCA1B
Guanylate cyclase activator 1B.
   
 0.532
EFCAB2
EF-hand calcium binding domain 2.
    
 0.529
FECH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
    
 
 0.528
ASB12
Ankyrin repeat and SOCS box containing 12.
    
 0.526
CABP4
Calcium binding protein 4.
    
 0.525
CCDC158
Coiled-coil domain containing 158.
    
 0.512
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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