STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
VAX1Ventral anterior homeobox 1. (333 aa)    
Predicted Functional Partners:
ZNF462
Zinc finger protein 462.
   
 0.668
PHACTR4
Phosphatase and actin regulator.
      
 0.596
VAX2
Ventral anterior homeobox 2.
   
 0.592
ASXL2
ASXL transcriptional regulator 2.
      
 0.573
FOXG1
Forkhead box G1.
   
 0.514
IPO13
Importin 13.
    
 
 0.495
TRMT9B
tRNA methyltransferase 9B (putative).
    
 
 0.473
IRF6
Interferon regulatory factor 6.
   
 0.420
ATOH7
Atonal bHLH transcription factor 7.
      
 0.407
PHACTR2
Phosphatase and actin regulator.
      
 0.405
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.