STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RUFY3RUN and FYVE domain containing 3. (487 aa)    
Predicted Functional Partners:
RUFY2
RUN and FYVE domain containing 2.
   
   0.783
RUFY1
RUN and FYVE domain containing 1.
    
 
 0.753
SHTN1
Shootin 1.
      
 0.706
ZC2HC1A
Zinc finger C2HC-type containing 1A.
      
 0.629
TRMT9B
tRNA methyltransferase 9B (putative).
    
   0.484
TEX10
Testis expressed 10.
     
  0.437
WDR18
WD repeat domain 18.
     
  0.437
RAB33A
RAB33A, member RAS oncogene family.
    
 
 0.435
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.