STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
VSTM2BV-set and transmembrane domain containing 2B. (259 aa)    
Predicted Functional Partners:
TNFAIP8L3
TNF alpha induced protein 8 like 3.
      
 0.698
LMCD1
LIM and cysteine rich domains 1.
      
 0.617
TMCC1
Transmembrane and coiled-coil domain family 1.
      
 0.574
DOC2B
Double C2 domain beta.
   
  
 0.561
WHRN
Whirlin.
      
 0.554
HPSE
Heparanase.
      
 0.493
CHODL
Chondrolectin.
      
 0.480
CRTAC1
Cartilage acidic protein 1.
   
  
 0.453
ARID5A
AT-rich interaction domain 5A.
      
 0.406
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.