STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYOD1Myogenic factor; Induces fibroblasts to differentiate into myoblasts. Acts as a transcriptional activator that promotes transcription of muscle- specific target genes and plays a role in muscle differentiation. (319 aa)    
Predicted Functional Partners:
TBP
TATA-box binding protein.
    
 0.922
TBPL1
TATA-box binding protein like 1.
    
 0.905
TCF12
Transcription factor 12.
   
 0.898
TCF3
Transcription factor 3.
   
 0.879
TCF4
Transcription factor 4.
   
 0.838
EP300
E1A binding protein p300.
    
 
 0.811
KAT2B
Lysine acetyltransferase 2B.
    
 
 0.770
MEF2D
Myocyte enhancer factor 2D.
    
 0.744
MEF2A
Myocyte enhancer factor 2A.
    
 0.710
ID1
Inhibitor of DNA binding 1, HLH protein.
    
 
 0.669
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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