Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LRRC66Leucine rich repeat containing 66. (887 aa)    
Predicted Functional Partners:
PRPF6
Pre-mRNA processing factor 6.
    
 
 0.640
SUSD3
Sushi domain containing 3.
      
 0.613
EIF5B
Eukaryotic translation initiation factor 5B.
      
 0.610
RGS19
Regulator of G protein signaling 19.
      
 0.609
NAGLU
N-acetyl-alpha-glucosaminidase.
      
 0.605
ACSBG2
Acyl-CoA synthetase bubblegum family member 2.
     
 0.576
C4orf19
Chromosome 4 open reading frame 19.
  
   
 0.559
GLOD4
Glyoxalase domain containing 4.
      
 0.552
BEND4
BEN domain containing 4.
      
 0.492
PDCL2
Phosducin like 2.
      
 0.490
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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