STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SCFD2Sec1 family domain containing 2; Belongs to the STXBP/unc-18/SEC1 family. (522 aa)    
Predicted Functional Partners:
RINT1
RAD50 interactor 1.
   
 
 0.953
STX18
Syntaxin 18.
    
 
 0.952
USE1
Unconventional SNARE in the ER 1.
   
   0.915
NBAS
Neuroblastoma amplified sequence.
   
 
 0.890
ZW10
Zw10 kinetochore protein.
    
 
 0.879
SCFD1
Sec1 family domain containing 1; Belongs to the STXBP/unc-18/SEC1 family.
    
 
 0.851
SEC22B
SEC22 homolog B, vesicle trafficking protein (gene/pseudogene); Belongs to the synaptobrevin family.
   
 
 0.833
C19orf25
Chromosome 19 open reading frame 25.
    
 
 0.797
NAPG
NSF attachment protein gamma.
    
 
 0.792
STX12
Syntaxin 12; Belongs to the syntaxin family.
    
   0.774
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.