STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ATP13A1Cation-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type V subfamily. (976 aa)    
Predicted Functional Partners:
GET1
Guided entry of tail-anchored proteins factor 1.
    
 
 0.737
EMC1
ER membrane protein complex subunit 1.
   
 
 0.732
SGTA
Small glutamine rich tetratricopeptide repeat containing alpha.
   
  
 0.672
SEC63
SEC63 homolog, protein translocation regulator.
   
 
 0.665
SGSM3
Small G protein signaling modulator 3.
      
 0.618
SPCS2
Signal peptidase complex subunit 2.
   
   0.604
EMC2
ER membrane protein complex subunit 2.
   
 
 0.597
LOC103225840
Uncharacterized protein.
      
 0.556
DLK1
Delta like non-canonical Notch ligand 1.
    
  0.545
PELO
Protein pelota homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs.
      
 0.535
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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